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  5. Ore_g08377

Ore_g08377


Description : not classified & original description: none


Gene families : OG0002579 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g08377

Target Alias Description ECC score Gene Family Method Actions
Adi_g018935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19100 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre06.g272000 No alias Vacuole membrane protein KMS1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_29333 No alias Vacuole membrane protein KMS1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os07g38380.1 LOC_Os07g38380 Vacuole membrane protein KMS1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g13715 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12849 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s3051.g028585 No alias not classified & original description: CDS=176-523 0.02 OrthoFinder output from all 47 species
Spa_g50528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!