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  5. Ore_g07739

Ore_g07739 (ZFN1)


Aliases : ZFN1

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g07739
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AT3G48440 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 OrthoFinder output from all 47 species
MA_10435282g0010 No alias C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_557223g0010 ZFN3 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e008903_P005 ZFN1, Zm00001e008903 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e017266_P001 Zm00001e017266 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 311 335
IPR000571 Znf_CCCH 271 292
IPR000571 Znf_CCCH 105 130
IPR000571 Znf_CCCH 59 82
IPR000571 Znf_CCCH 13 38
No external refs found!