1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g07168

Ore_g07168


Description : not classified & original description: none


Gene families : OG0000627 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000627_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g07168
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AT3G21100 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Adi_g025310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g58788 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene71443.t2 Aspi01Gene71443 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05445 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010074 No alias not classified & original description: CDS=287-2170 0.02 OrthoFinder output from all 47 species
Spa_g12333 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50143 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e024022_P001 Zm00001e024022 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 189 209
IPR025605 OST-HTH/LOTUS_dom 238 315
IPR000504 RRM_dom 355 403
No external refs found!