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  5. Ore_g07138

Ore_g07138


Description : E3 ubiquitin ligase *(PIR) & original description: none


Gene families : OG0001288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001288_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g07138

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0010.g012190 No alias E3 ubiquitin ligase *(PIR) & original description: CDS=1-1752 0.02 OrthoFinder output from all 47 species
Dcu_g09106 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12948 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g17835 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20727 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005333 No alias E3 ubiquitin ligase *(PIR) & original description: CDS=227-3001 0.02 OrthoFinder output from all 47 species
Zm00001e033984_P001 Zm00001e033984 MND1-interacting protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR046527 PIR2-like_helical 160 272
No external refs found!