1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g07102

Ore_g07102


Description : component *(uL15) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001601 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001601_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g07102
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00158350 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
AT1G23290 RPL27AB, RPL27A Ribosomal protein L18e/L15 superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G70600 No alias Ribosomal protein L18e/L15 superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g102573 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Adi_g128537 RPL27AB, RPL27A component *(uL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g06147 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cba_g68308 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cre02.g115200 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Dac_g01203 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Gb_26884 No alias component RPL27a of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os02g07890.2 LOC_Os02g07890 component RPL27a of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os03g29460.1 LOC_Os03g29460 component RPL27a of LSU proteome component 0.04 OrthoFinder output from all 47 species
LOC_Os07g42170.1 RPL27AB, RPL27A,... component RPL27a of LSU proteome component 0.02 OrthoFinder output from all 47 species
Lfl_g25920 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
MA_102140g0020 No alias component RPL27a of LSU proteome component 0.03 OrthoFinder output from all 47 species
MA_10436259g0020 No alias component RPL27a of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp1g15440.1 No alias component RPL27a of LSU proteome component 0.04 OrthoFinder output from all 47 species
Pir_g29637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c6_3470V3.1 Pp3c6_3470 Ribosomal protein L18e/L15 superfamily protein 0.02 OrthoFinder output from all 47 species
Sam_g25032 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Solyc03g112360.1.1 Solyc03g112360 component RPL27a of LSU proteome component 0.05 OrthoFinder output from all 47 species
Spa_g17344 RPL27AB, RPL27A component *(uL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Tin_g02964 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e010753_P001 Zm00001e010753 component RPL27a of LSU proteome component 0.04 OrthoFinder output from all 47 species
Zm00001e035537_P001 Zm00001e035537 component RPL27a of LSU proteome component 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 59 173
No external refs found!