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  5. Ore_g06884

Ore_g06884 (emb1417)


Aliases : emb1417

Description : not classified & original description: none


Gene families : OG0001686 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001686_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g06884
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Ala_g25612 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21409 emb1417 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19716 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g55290.2 emb1417, LOC_Os01g55290 Pentatricopeptide repeat-containing protein At4g21190... 0.05 OrthoFinder output from all 47 species
Lfl_g05415 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09758 emb1417 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g00768 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61353 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g03858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09326 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g32884 emb1417 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019767_P001 emb1417, Zm00001e019767 Pentatricopeptide repeat-containing protein At4g21190... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051743 red chlorophyll catabolite reductase activity IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 257 284
IPR002885 Pentatricopeptide_repeat 220 248
No external refs found!