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  5. Ore_g06700

Ore_g06700 (ATCRSH, CRSH)


Aliases : ATCRSH, CRSH

Description : ppGpp synthetase *(CRSH) & original description: none


Gene families : OG0003616 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003616_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g06700
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00095180 ATCRSH, CRSH,... Probable GTP diphosphokinase CRSH, chloroplastic... 0.02 OrthoFinder output from all 47 species
AT3G17470 ATCRSH, CRSH Ca2+-activated RelA/spot homolog 0.04 OrthoFinder output from all 47 species
Adi_g014580 ATCRSH, CRSH ppGpp synthetase *(CRSH) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08360 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g17646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16932 ATCRSH, CRSH ppGpp synthetase *(CRSH) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17677 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.30G071200.1 Ceric.30G071200 not classified & original description: pacid=50608643... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000042.103 No alias Probable GTP diphosphokinase CRSH3, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dcu_g02034 ATCRSH, CRSH ppGpp synthetase *(CRSH) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24495 ATCRSH, CRSH ppGpp synthetase *(CRSH) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017689001 ATCRSH, CRSH Probable GTP diphosphokinase CRSH, chloroplastic... 0.03 OrthoFinder output from all 47 species
Len_g35281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430581g0010 ATCRSH, CRSH Probable GTP diphosphokinase CRSH, chloroplastic... 0.06 OrthoFinder output from all 47 species
Msp_g47140 ATCRSH, CRSH ppGpp synthetase *(CRSH) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50135 No alias ppGpp synthetase *(CRSH) & original description: none 0.06 OrthoFinder output from all 47 species
Solyc12g098920.2.1 ATCRSH, CRSH,... Probable GTP diphosphokinase CRSH, chloroplastic... 0.04 OrthoFinder output from all 47 species
Spa_g14655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e031121_P001 ATCRSH, CRSH,... Probable GTP diphosphokinase CRSH1, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR007685 RelA_SpoT 414 539
IPR002048 EF_hand_dom 584 639
No external refs found!