Ore_g06327

Description : component *(U1C) of U1 snRNP complex & original description: none

Gene families : OG0002867 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002867_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g06327
Cluster	HCCA: Cluster_111

Target	Alias	Description	ECC score	Gene Family Method
Adi_g007520	No alias	component *(U1C) of U1 snRNP complex & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g09085	No alias	component *(U1C) of U1 snRNP complex & original description: none	0.03	OrthoFinder output from all 47 species
Cre09.g401300	No alias	RNA processing.RNA splicing.U2-type-intron-specific...	0.02	OrthoFinder output from all 47 species
MA_10433804g0010	No alias	component U1C of U1 small nuclear ribonucleoprotein...	0.04	OrthoFinder output from all 47 species
Pnu_g07711	No alias	component *(U1C) of U1 snRNP complex & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g29133	No alias	component *(U1C) of U1 snRNP complex & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005730	nucleolus	IEP	HCCA
MF	GO:0008134	transcription factor binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013085	U1-CZ_Znf_C2H2	1	38

External Links

No external refs found!