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  5. Ore_g05728

Ore_g05728


Description : auxiliary VPS23-interacting component *(CFS1) of ESCRT-I complex & original description: none


Gene families : OG0000821 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g05728

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00170p00062530 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G43230 No alias RING/FYVE/PHD-type zinc finger family protein 0.03 OrthoFinder output from all 47 species
Cba_g03268 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Ceric.37G042800.1 Ceric.37G042800 auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Dcu_g02930 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Dde_g02242 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.04 OrthoFinder output from all 47 species
GSVIVT01015009001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_38623 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g55763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g11370.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g11153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15854 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Ppi_g01148 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Solyc02g071980.3.1 Solyc02g071980 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g31118 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Zm00001e014385_P001 Zm00001e014385 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR007461 Ysc84_actin-binding 385 510
IPR001841 Znf_RING 24 68
IPR000306 Znf_FYVE 203 268
No external refs found!