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  5. Ore_g05588

Ore_g05588


Description : not classified & original description: none


Gene families : OG0001354 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001354_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g05588

Target Alias Description ECC score Gene Family Method Actions
Ore_g00549 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g00954 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g00974 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g01025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02878 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g03238 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g04632 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g07175 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g08111 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g09681 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g11847 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g11877 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g12255 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g13312 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g14036 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g14320 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ore_g15355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15989 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18495 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18789 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g18984 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g21821 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g21967 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g22105 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g22292 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g22903 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g23927 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g24234 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g24235 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g24869 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26948 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g27017 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g27737 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g28222 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g28470 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g28543 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g28722 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g29809 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g29811 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g30938 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g32240 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g32338 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g32443 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g32813 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g33450 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g33636 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33892 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g34183 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35167 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g35267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35367 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g36257 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g36265 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g37340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37405 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g37406 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g37447 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g38462 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38824 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g38862 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g41376 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g44559 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR025558 DUF4283 360 461
IPR001878 Znf_CCHC 527 542
No external refs found!