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  5. Ore_g05465

Ore_g05465 (ATG8F)


Aliases : ATG8F

Description : autophagosome ubiquitin-fold protein *(ATG8) & original description: none


Gene families : OG0000801 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000801_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g05465

Target Alias Description ECC score Gene Family Method Actions
Adi_g085508 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Ala_g16349 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Aob_g02886 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Aop_g19894 ATG8D autophagosome ubiquitin-fold protein *(ATG8) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0221.g058729 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.05 OrthoFinder output from all 47 species
Dde_g06398 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01030430001 ATG8C Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.02 OrthoFinder output from all 47 species
LOC_Os07g32800.2 ATG8C, LOC_Os07g32800 ATG8 autophagosome ubiquitin-fold protein 0.04 OrthoFinder output from all 47 species
Lfl_g00514 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g12879 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g30636 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Mp1g21590.1 ATG8C ATG8 autophagosome ubiquitin-fold protein 0.02 OrthoFinder output from all 47 species
Msp_g03687 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g27314 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Spa_g01434 ATG8G autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Tin_g09243 ATG8F autophagosome ubiquiTin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Tin_g23087 ATG8F autophagosome ubiquiTin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Tin_g38203 ATG8F autophagosome ubiquiTin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e041680_P001 ATG8C, Zm00001e041680 ATG8 autophagosome ubiquitin-fold protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR004241 Atg8-like 15 118
No external refs found!