Zm00001d034984 (GRMZM2G052239)


Aliases : GRMZM2G052239

Description : 33.99 development.unspecified Encodes a NAC-domain transcription factor. Expressed in the vascular tissue. vascular related NAC-domain protein 1 (VND1)


Gene families : OG_01_0000027 (Gene family) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d034984
Cluster HCCA cluster: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AT1G12260 EMB2749,... NAC 007 0.06 Gene family
AT1G32770 ANAC012, NST3,... NAC domain containing protein 12 0.08 Gene family
AT1G62700 VND5, ANAC026 Arabidopsis NAC domain containing protein 26 0.06 Gene family
AT1G65910 anac028, NAC028 NAC domain containing protein 28 0.04 Gene family
AT1G71930 ANAC030, VND7 vascular related NAC-domain protein 7 0.06 Gene family
AT2G18060 VND1, ANAC037 vascular related NAC-domain protein 1 0.04 Gene family
AT2G46770 NST1, ANAC043, EMB2301 NAC (No Apical Meristem) domain transcriptional... 0.08 Gene family
AT3G17730 anac057, NAC057 NAC domain containing protein 57 0.03 Gene family
AT3G61910 NST2, NAC066, ANAC066 NAC domain protein 66 0.08 Gene family
AT4G36160 VND2, NAC076, ANAC076 NAC domain containing protein 76 0.06 Gene family
GSVIVT01001264001 No alias 33.99 development.unspecified Encodes a NAC-domain... 0.06 Gene family
GSVIVT01008291001 No alias 33.99 development.unspecified NAC domain containing... 0.03 Gene family
GSVIVT01018623001 No alias 33.99 development.unspecified Encodes a NAC-domain... 0.07 Gene family
GSVIVT01018809001 No alias 33.99 development.unspecified Encodes a NAC-domain... 0.06 Gene family
GSVIVT01019670001 No alias 33.99 development.unspecified NAC transcription factor... 0.04 Gene family
GSVIVT01027431001 No alias 33.99 development.unspecified NAC transcription factor... 0.04 Gene family
GSVIVT01029392001 No alias 33.99 development.unspecified NAC domain containing... 0.02 Gene family
GSVIVT01035554001 No alias 33.99 development.unspecified Arabidopsis NAC domain... 0.03 Gene family
LOC_Os02g42970 Os02g0643600 33.99 development.unspecified Encodes a NAC-domain... 0.02 Gene family
LOC_Os06g04090 Os06g0131700 33.99 development.unspecified NAC transcription factor... 0.02 Gene family
LOC_Os06g23650 Os06g0344900 33.99 development.unspecified Transcriptional activator... 0.03 Gene family
LOC_Os07g48550 Os07g0684800 33.99 development.unspecified Arabidopsis NAC domain... 0.04 Gene family
LOC_Os08g02300 Os08g0115800 33.99 development.unspecified NAC transcription factor... 0.03 Gene family
LOC_Os08g40030 Os08g0511200 33.99 development.unspecified Identified in an enhancer... 0.02 Gene family
LOC_Os09g32260 Os09g0497900 33.99 development.unspecified Arabidopsis NAC domain... 0.02 Gene family
MA_109677g0010 No alias 33.99 development.unspecified NAC domain containing... 0.02 Gene family
MA_27968g0010 No alias 27.3.27 RNA.regulation of transcription.NAC domain... 0.02 Gene family
Solyc02g036430.2.1 Solyc02g036430.2 27.3.27 RNA.regulation of transcription.NAC domain... 0.02 Gene family
Solyc02g084345.1.1 Solyc02g084345.1 33.99 development.unspecified Encodes a NAC-domain... 0.08 Gene family
Solyc02g088180.3.1 Solyc02g088180.3 33.99 development.unspecified NAC domain containing... 0.04 Gene family
Solyc03g083880.3.1 Solyc03g083880.3 33.99 development.unspecified Encodes a NAC-domain... 0.07 Gene family
Solyc06g034340.2.1 Solyc06g034340.2 33.99 development.unspecified Encodes a NAC-domain... 0.06 Gene family
Solyc06g065410.3.1 Solyc06g065410.3 33.99 development.unspecified Encodes a NAC-domain... 0.05 Gene family
Solyc06g069100.2.1 Solyc06g069100.2 33.99 development.unspecified NAC domain containing... 0.02 Gene family
Solyc08g008660.3.1 Solyc08g008660.3 33.99 development.unspecified NAC transcription factor... 0.07 Gene family
Solyc12g036480.2.1 Solyc12g036480.2 33.99 development.unspecified NAC domain containing... 0.03 Gene family
Zm00001d016950 GRMZM2G146380 33.99 development.unspecified NAC domain containing... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003441 NAC-dom 20 158
No external refs found!