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  5. Ore_g05228

Ore_g05228


Description : regulatory factor *(RIQ) of thylakoid grana stacking & original description: none


Gene families : OG0004779 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004779_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g05228
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00084050 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G74730 No alias Protein of unknown function (DUF1118) 0.06 OrthoFinder output from all 47 species
Adi_g039949 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Aev_g00516 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Ala_g17180 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Aob_g05587 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Aop_g12282 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Azfi_s0157.g053809 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Dac_g01953 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
GSVIVT01008063001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os01g40310.1 LOC_Os01g40310 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g00985 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Lfl_g05217 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
MA_10433575g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Mp3g09060.1 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g04786 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Nbi_g15112 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Pir_g20319 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Solyc03g113240.3.1 Solyc03g113240 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g04757 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Tin_g32284 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Zm00001e020546_P001 Zm00001e020546 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR009500 DUF1118 83 196
No external refs found!