Ore_g04942 (AtcpRRF, HFP108, cpRRF, RRF)


Aliases : AtcpRRF, HFP108, cpRRF, RRF

Description : translation ribosome recycling factor *(RRF) & original description: none


Gene families : OG0006870 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006870_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g04942
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00070570 AtcpRRF, HFP108,... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT3G63190 AtcpRRF, HFP108,... ribosome recycling factor, chloroplast precursor 0.05 OrthoFinder output from all 47 species
Adi_g007469 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Aev_g21988 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Aev_g21989 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.02 OrthoFinder output from all 47 species
Als_g02938 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.05 OrthoFinder output from all 47 species
Aob_g01803 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Aop_g23021 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene01280.t1 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Cba_g05774 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.09 OrthoFinder output from all 47 species
Ceric.25G011000.1 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.07 OrthoFinder output from all 47 species
Cre03.g156050 AtcpRRF, HFP108,... Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dac_g03594 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g01083 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.06 OrthoFinder output from all 47 species
Dde_g00377 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01001148001 AtcpRRF, HFP108,... Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
LOC_Os07g38300.1 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.05 OrthoFinder output from all 47 species
Len_g47851 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g05872 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.05 OrthoFinder output from all 47 species
Msp_g11460 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g28974 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.05 OrthoFinder output from all 47 species
Pir_g48097 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g08783 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006320 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.05 OrthoFinder output from all 47 species
Sam_g15107 No alias translation ribosome recycling factor *(RRF) & original... 0.08 OrthoFinder output from all 47 species
Solyc09g065270.3.1 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.05 OrthoFinder output from all 47 species
Spa_g44127 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Tin_g00796 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e021862_P002 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.05 OrthoFinder output from all 47 species
Zm00001e029168_P003 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR023584 Ribosome_recyc_fac_dom 118 279
No external refs found!