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  5. Ore_g04898

Ore_g04898


Description : scaffold component *(LCAA) of Mg-protoporphyrin IX monomethylester cyclase complex & original description: none


Gene families : OG0006125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g04898
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00179590 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.05 OrthoFinder output from all 47 species
AT5G58250 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
Aev_g02557 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.03 OrthoFinder output from all 47 species
Als_g04177 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.03 OrthoFinder output from all 47 species
Aop_g18009 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.05 OrthoFinder output from all 47 species
Azfi_s0423.g069214 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.03 OrthoFinder output from all 47 species
Ceric.30G052300.1 Ceric.30G052300 scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.05 OrthoFinder output from all 47 species
Dcu_g18827 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.07 OrthoFinder output from all 47 species
Ehy_g15832 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.05 OrthoFinder output from all 47 species
GSVIVT01024524001 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 OrthoFinder output from all 47 species
LOC_Os03g21370.1 LOC_Os03g21370 scaffolding component LCAA of Mg-protoporphyrin IX... 0.05 OrthoFinder output from all 47 species
Len_g20674 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.05 OrthoFinder output from all 47 species
MA_46214g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g08000.1 No alias scaffolding component LCAA of Mg-protoporphyrin IX... 0.04 OrthoFinder output from all 47 species
Nbi_g03333 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0217.g026072 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.05 OrthoFinder output from all 47 species
Sam_g06125 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.04 OrthoFinder output from all 47 species
Solyc06g007760.4.1 Solyc06g007760 scaffolding component LCAA of Mg-protoporphyrin IX... 0.04 OrthoFinder output from all 47 species
Spa_g16999 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.05 OrthoFinder output from all 47 species
Zm00001e001556_P001 Zm00001e001556 scaffolding component LCAA of Mg-protoporphyrin IX... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0047746 chlorophyllase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR019616 Ycf54 106 195
No external refs found!