Ore_g04633 (SMT1, CPH)

Aliases : SMT1, CPH

Description : EC_2.1 transferase transferring one-carbon group & original description: none

Gene families : OG0000656 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000656_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g04633
Cluster	HCCA: Cluster_110

Target	Alias	Description	ECC score	Gene Family Method
AT1G76090	SMT3	sterol methyltransferase 3	0.03	OrthoFinder output from all 47 species
AT5G13710	SMT1, CPH	sterol methyltransferase 1	0.02	OrthoFinder output from all 47 species
Adi_g021766	SMT2, FRL1, CVP1	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Ala_g08847	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.05	OrthoFinder output from all 47 species
Ala_g11961	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Aop_g01656	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Cba_g10244	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Cre12.g500500	SMT3	Lipid metabolism.phytosterols.campesterol...	0.01	OrthoFinder output from all 47 species
Dac_g25896	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Dde_g15360	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
GSVIVT01023969001	No alias	Lipid metabolism.phytosterols.campesterol...	0.02	OrthoFinder output from all 47 species
GSVIVT01032155001	SMT1, CPH	Lipid metabolism.phytosterols.campesterol...	0.03	OrthoFinder output from all 47 species
Msp_g11163	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Solyc01g111830.3.1	SMT2, FRL1,...	sterol C-24 methyltransferase	0.02	OrthoFinder output from all 47 species
Solyc10g055680.1.1	SMT2, FRL1,...	sterol C-24 methyltransferase	0.02	OrthoFinder output from all 47 species
Spa_g24171	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
Spa_g53536	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	Interproscan
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013216	Methyltransf_11	159	255
IPR013705	Sterol_MeTrfase_C	332	395

External Links

No external refs found!

Ore_g04633 (SMT1, CPH)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation