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  5. Ore_g04520

Ore_g04520 (OBE2)


Aliases : OBE2

Description : transcriptional co-regulator *(Oberon) & original description: none


Gene families : OG0000521 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000521_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g04520

Target Alias Description ECC score Gene Family Method Actions
AT3G07780 OBE1 Protein of unknown function (DUF1423) 0.02 OrthoFinder output from all 47 species
Adi_g112659 OBE1 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene32431.t1 OBE2, Aspi01Gene32431 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Dde_g00775 OBE2 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g18097 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g04752 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
MA_8062g0010 No alias no description available(sp|q10pc5|tta1_orysj : 115.0) 0.02 OrthoFinder output from all 47 species
Pir_g41442 No alias transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Smo86264 No alias Protein OBERON 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g08413 OBE1 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Spa_g30885 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Spa_g46295 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Tin_g03348 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e011323_P001 OBE2, Zm00001e011323 OBERON-like protein OS=Nicotiana benthamiana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR032535 Oberon_cc 453 581
IPR032881 Oberon_PHD 240 361
No external refs found!