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  5. Ore_g04462

Ore_g04462


Description : not classified & original description: none


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g04462
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Adi_g011502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g084661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g100933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g108733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08032 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03129 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08517 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g09611 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Als_g19267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61202 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Aop_g02905 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Aop_g62599 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29933.t2 Aspi01Gene29933 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68976.t1 Aspi01Gene68976 regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015632 No alias not classified & original description: CDS=147-1991 0.03 OrthoFinder output from all 47 species
Azfi_s0280.g062273 No alias not classified & original description: CDS=315-2570 0.03 OrthoFinder output from all 47 species
Cba_g07339 HEN4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12024 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g71670 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G052900.1 Ceric.02G052900 not classified & original description: pacid=50583938... 0.03 OrthoFinder output from all 47 species
Ceric.14G007100.1 Ceric.14G007100 not classified & original description: pacid=50632910... 0.04 OrthoFinder output from all 47 species
Ceric.14G023600.1 Ceric.14G023600 not classified & original description: pacid=50632924... 0.04 OrthoFinder output from all 47 species
Dcu_g12897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g24061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g11109 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031037001 No alias KH domain-containing protein At4g18375 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os06g23460.1 LOC_Os06g23460 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
LOC_Os09g32300.1 LOC_Os09g32300 KH domain-containing protein HEN4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g07805 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g36497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430861g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10433640g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_20325g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_3715g0020 No alias RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Msp_g10485 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g12132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g14000 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Ppi_g41944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019575 No alias not classified & original description: CDS=226-2445 0.03 OrthoFinder output from all 47 species
Spa_g05211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05212 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 391 458
IPR004088 KH_dom_type_1 308 360
IPR004088 KH_dom_type_1 150 217
IPR004088 KH_dom_type_1 45 99
No external refs found!