Ore_g04292


Description : not classified & original description: none


Gene families : OG0001550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001550_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g04292

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00164330 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
AT1G11490 No alias zinc finger (C2H2 type) family protein 0.02 OrthoFinder output from all 47 species
AT4G27240 No alias zinc finger (C2H2 type) family protein 0.03 OrthoFinder output from all 47 species
AT5G54630 No alias zinc finger protein-related 0.03 OrthoFinder output from all 47 species
Aspi01Gene29956.t1 Aspi01Gene29956 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49808.t1 Aspi01Gene49808 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0305.g063895 No alias not classified & original description: CDS=1048-1284 0.03 OrthoFinder output from all 47 species
Ceric.39G048600.1 Ceric.39G048600 not classified & original description: pacid=50582455... 0.03 OrthoFinder output from all 47 species
Dde_g00525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008925001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
Gb_25842 No alias C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Gb_30270 No alias C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Gb_32897 No alias C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os01g57650.1 LOC_Os01g57650 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os03g15790.1 LOC_Os03g15790 C2H2 zinc finger transcription factor 0.07 OrthoFinder output from all 47 species
LOC_Os04g59380.1 LOC_Os04g59380 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os06g46910.1 LOC_Os06g46910 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os11g06840.1 LOC_Os11g06840 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_103943g0010 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_10426153g0010 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_17724g0010 No alias C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
MA_525155g0010 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Nbi_g13834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g26086 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014168 No alias not classified & original description: CDS=1-1884 0.03 OrthoFinder output from all 47 species
Smo15610 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Smo236040 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
Solyc02g079920.3.1 Solyc02g079920 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g50745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50839 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e008786_P002 Zm00001e008786 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e019606_P002 Zm00001e019606 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e028937_P001 Zm00001e028937 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!