1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g04289

Ore_g04289


Description : not classified & original description: none


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g04289
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00103260 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G12030 No alias Protein of unknown function (DUF506) 0.03 OrthoFinder output from all 47 species
AT2G20670 No alias Protein of unknown function (DUF506) 0.02 OrthoFinder output from all 47 species
AT3G22970 No alias Protein of unknown function (DUF506) 0.02 OrthoFinder output from all 47 species
Adi_g011111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023073 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0254.g060413 No alias not classified & original description: CDS=230-1843 0.02 OrthoFinder output from all 47 species
Cba_g04914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12512 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16720 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018080001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os05g44300.1 LOC_Os05g44300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g29121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_6561322g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_659011g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g06137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38624 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44508 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g14036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10620 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g078160.3.1 Solyc02g078160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 80 272
No external refs found!