Ore_g03879 (OBP4)

Aliases : OBP4

Description : transcription factor *(DOF) & original description: none

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g03879

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00058p00210070	TMO6,...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AT3G45610	No alias	Dof-type zinc finger DNA-binding family protein	0.04	OrthoFinder output from all 47 species
AT4G38000	DOF4.7	DNA binding with one finger 4.7	0.05	OrthoFinder output from all 47 species
AT5G65590	No alias	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
AT5G66940	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
Adi_g056971	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g02219	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01005057001	TMO6	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
GSVIVT01016538001	OBP3	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
Gb_09675	CDF2	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
LOC_Os01g64590.1	LOC_Os01g64590	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Len_g10120	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g10876	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g15959	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g23147	CDF3	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
MA_939289g0010	ADOF2, DOF2	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Pir_g32406	No alias	transcription factor *(DOF) & original description: none	0.06	OrthoFinder output from all 47 species
Pnu_g11127	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g09266	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g076850.2.1	Solyc02g076850	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Solyc03g112930.3.1	HCA2, DOF5.6,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc04g070960.3.1	Solyc04g070960	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc05g054510.2.1	OBP3, Solyc05g054510	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Solyc06g076030.3.1	Solyc06g076030	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc08g082910.2.1	Solyc08g082910	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc10g086440.2.1	DOF2.4,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Spa_g20340	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g26148	CDF1	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e031750_P001	Zm00001e031750	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e041444_P001	Zm00001e041444	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	27	83

External Links

No external refs found!

Ore_g03879 (OBP4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation