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  5. Ore_g03449

Ore_g03449 (RCD3, CDI3, SLAC1, OZS1)


Aliases : RCD3, CDI3, SLAC1, OZS1

Description : anion channel *(SLAC) & original description: none


Gene families : OG0000650 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000650_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g03449
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene71087.t1 RCD3, CDI3,... anion channel *(SLAC) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0107.g045132 SLAH3 anion channel *(SLAC) & original description: CDS=838-3114 0.04 OrthoFinder output from all 47 species
Ceric.04G105500.1 RCD3, CDI3,... anion channel *(SLAC) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g31369 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g42434 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030451001 SLAH1 S-type anion channel SLAH1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os01g43460.2 SLAH3, LOC_Os01g43460 anion channel (SLAC) 0.02 OrthoFinder output from all 47 species
LOC_Os04g48530.1 RCD3, CDI3,... anion channel (SLAC) 0.02 OrthoFinder output from all 47 species
Ore_g36146 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_2990V3.1 Pp3c4_2990 C4-dicarboxylate transporter/malic acid transport protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017763 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: CDS=20-1597 0.03 OrthoFinder output from all 47 species
Zm00001e007191_P002 RCD3, CDI3,... anion channel (SLAC) 0.02 OrthoFinder output from all 47 species
Zm00001e020426_P001 SLAH3, Zm00001e020426 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR004695 SLAC1/Mae1/Ssu1/TehA 152 454
No external refs found!