1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g03299

Ore_g03299


Description : regulatory protein *(LARP6) of mRNA quality control & original description: none


Gene families : OG0002191 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002191_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g03299

Target Alias Description ECC score Gene Family Method Actions
Adi_g088327 No alias regulatory protein *(LARP6) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
Ceric.03G066600.1 Ceric.03G066600 regulatory protein *(LARP6) of mRNA quality control &... 0.06 OrthoFinder output from all 47 species
Ehy_g26244 No alias regulatory protein *(LARP6) of mRNA quality control &... 0.02 OrthoFinder output from all 47 species
Gb_21919 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_3844g0010 No alias La-related protein 6A OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g24860 No alias regulatory protein *(LARP6) of mRNA quality control &... 0.02 OrthoFinder output from all 47 species
Pnu_g13003 No alias regulatory protein *(LARP6) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
Spa_g26783 No alias regulatory protein *(LARP6) of mRNA quality control &... 0.02 OrthoFinder output from all 47 species
Spa_g40148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05630 No alias regulatory protein *(LARP6) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
Zm00001e039790_P001 Zm00001e039790 La-related protein 6B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006630 La_HTH 211 269
No external refs found!