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  5. Ore_g03222

Ore_g03222 (ZFN1)


Aliases : ZFN1

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g03222

Target Alias Description ECC score Gene Family Method Actions
AT5G16540 ZFN3 zinc finger nuclease 3 0.02 OrthoFinder output from all 47 species
Aev_g04017 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aev_g10552 ZFN1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene03268.t1 ZFN1, Aspi01Gene03268 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ceric.16G041800.1 ZFN1, Ceric.16G041800 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Ehy_g18381 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ehy_g30722 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01017774001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
MA_704658g0010 ATHMA1, HMA1 C3H zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Msp_g09098 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Nbi_g05812 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Pnu_g30586 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ppi_g29535 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sam_g21674 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Spa_g29873 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005856 cytoskeleton IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 174 199
IPR000571 Znf_CCCH 83 108
IPR000571 Znf_CCCH 381 405
IPR000571 Znf_CCCH 130 153
IPR000571 Znf_CCCH 335 360
No external refs found!