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  5. Ore_g03216

Ore_g03216


Description : not classified & original description: none


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g03216
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00116010 evm_27.TU.AmTr_v1... KH domain-containing protein At4g18375 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G15270 No alias RNA-binding KH domain-containing protein 0.02 OrthoFinder output from all 47 species
AT5G64390 HEN4 RNA-binding KH domain-containing protein 0.05 OrthoFinder output from all 47 species
Adi_g008962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g010493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g017897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022420 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g028830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074054 HEN4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075983 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g092270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g096226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106357 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g115536 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09715 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g15857 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04253 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Aop_g29218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0280.g062273 No alias not classified & original description: CDS=315-2570 0.02 OrthoFinder output from all 47 species
Cba_g12254 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Cba_g17642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G032000.1 Ceric.17G032000 regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.04 OrthoFinder output from all 47 species
Dac_g05129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g24061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_31686 No alias RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Gb_38220 No alias RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
LOC_Os01g13470.1 LOC_Os01g13470 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
LOC_Os06g23460.1 LOC_Os06g23460 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
LOC_Os08g10030.1 LOC_Os08g10030 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
LOC_Os09g32300.1 LOC_Os09g32300 KH domain-containing protein HEN4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g10062 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430861g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_12604g0010 No alias RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Msp_g32267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06520 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g00616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13999 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Ppi_g01057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008079 No alias not classified & original description: CDS=527-2194 0.03 OrthoFinder output from all 47 species
Sam_g08472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11931 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12504 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13844 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Sam_g16383 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g034200.3.1 Solyc03g034200 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Solyc03g082980.3.1 Solyc03g082980 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Solyc05g007810.3.1 Solyc05g007810 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Solyc08g048500.3.1 Solyc08g048500 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc12g055780.3.1 Solyc12g055780 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Spa_g08106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22547 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g39448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004486_P005 Zm00001e004486 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e012623_P002 Zm00001e012623 RNA-binding KH domain-containing protein RCF3... 0.04 OrthoFinder output from all 47 species
Zm00001e039986_P003 Zm00001e039986 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 192 259
IPR004088 KH_dom_type_1 48 99
No external refs found!