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  5. Ore_g03200

Ore_g03200 (REME1)


Aliases : REME1

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g03200

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00155170 CRR2,... Pentatricopeptide repeat-containing protein At3g46790,... 0.02 OrthoFinder output from all 47 species
AMTR_s00017p00256920 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Aev_g40066 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06159 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26615 LOI1, MEF11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26680 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g63751 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g19032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27592 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36669 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06679 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29262 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33579 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s2932.g113765 CRR22 not classified & original description: CDS=1-1710 0.05 OrthoFinder output from all 47 species
Cba_g63697 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G051300.1 CRR22, Ceric.04G051300 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.07G053200.1 Ceric.07G053200 not classified & original description: pacid=50626825... 0.04 OrthoFinder output from all 47 species
Ceric.10G047500.1 Ceric.10G047500 not classified & original description: pacid=50612222... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000383.101 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.200 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g06499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07044 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12504 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_11981 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.05 OrthoFinder output from all 47 species
Gb_15811 No alias Pentatricopeptide repeat-containing protein At2g39620... 0.04 OrthoFinder output from all 47 species
Gb_23084 OTP84 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
Gb_28764 CRR2 RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species
Gb_38824 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
LOC_Os04g14130.1 LOC_Os04g14130 Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
LOC_Os06g08650.1 LOC_Os06g08650 Pentatricopeptide repeat-containing protein At2g03380,... 0.03 OrthoFinder output from all 47 species
Len_g20943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_102449g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
MA_10277392g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
MA_10430355g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_10432670g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_10432670g0020 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
MA_11454g0010 OTP84 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_114565g0020 OTP84 Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
MA_116829g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_117650g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
MA_135424g0010 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.05 OrthoFinder output from all 47 species
MA_185098g0010 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.04 OrthoFinder output from all 47 species
MA_193080g0010 CRR22 Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
MA_230261g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_32723g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
MA_33151g0010 OTP86 Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
MA_3502g0010 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
MA_501007g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_52613g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
MA_56322g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_56660g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_61422g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_6527g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_658463g0010 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_724726g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_8868720g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
MA_9384g0020 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.05 OrthoFinder output from all 47 species
MA_953793g0020 DOT4 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
MA_98224g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Msp_g14080 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21420 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g01285 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g05580 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g12690 REME1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g12878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g13275 OTP82 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g14064 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18545 OTP82 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g19780 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g22972 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g24442 REME1 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g26218 REME1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g27030 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g30030 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g30445 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40648 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g41731 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g42335 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g43973 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63850 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010845 No alias not classified & original description: CDS=1-381 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015638 EMB2758 not classified & original description: CDS=1-2175 0.05 OrthoFinder output from all 47 species
Sam_g01624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g04723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015727_P001 Zm00001e015727 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.04 OrthoFinder output from all 47 species
Zm00001e030553_P001 Zm00001e030553 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR046848 E_motif 341 403
IPR002885 Pentatricopeptide_repeat 24 54
IPR002885 Pentatricopeptide_repeat 298 322
IPR002885 Pentatricopeptide_repeat 2 22
IPR002885 Pentatricopeptide_repeat 198 220
IPR032867 DYW_dom 439 531
IPR002885 Pentatricopeptide_repeat 224 271
IPR002885 Pentatricopeptide_repeat 122 167
No external refs found!