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Aliases : At-SCL30A, SCL30A
Description : RNA splicing factor *(SCL28/30/33) & original description: none
Gene families : OG0001193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001193_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g03163 | |
| Cluster | HCCA: Cluster_176 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00197p00027080 | At-SCL28, SCL28,... | RNA processing.RNA splicing.spliceosome-associated... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g10641 | At-SCL30A, SCL30A | RNA splicing factor *(SCL28/30/33) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g14064 | At-SCL30A, SCL30A | RNA splicing factor *(SCL28/30/33) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01001344001 | At-SCL30A, SCL30A | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g01880.1 | At-SCL30A, SCL30A | SCL28/30/33 RNA splicing factor | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g09492 | At-SCL30A, SCL30A | RNA splicing factor *(SCL28/30/33) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05645 | At-SCL30A, SCL30A | RNA splicing factor *(SCL28/30/33) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g005820.4.1 | At-SCL30A,... | SCL28/30/33 RNA splicing factor | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g080660.3.1 | At-SCL28, SCL28,... | SCL28/30/33 RNA splicing factor | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 38 | 108 |
| No external refs found! |