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  5. LOC_Os12g42610.1

LOC_Os12g42610.1


Description : transcription factor (YABBY)


Gene families : OG_01_0000890 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000890_tree ,
OG_02_0002078 (LandPlants) Phylogenetic Tree(s): OG_02_0002078_tree ,
OG_03_0001123 (SeedPlants) Phylogenetic Tree(s): OG_03_0001123_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g42610.1
Cluster HCCA: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00199030 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AMTR_s00085p00032940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.04 Archaeplastida
AT1G69180 CRC Plant-specific transcription factor YABBY family protein 0.05 Archaeplastida
AT2G26580 YAB5 plant-specific transcription factor YABBY family protein 0.05 Archaeplastida
GSVIVT01012246001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.06 Archaeplastida
GSVIVT01013778001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01037533001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
MA_10432332g0010 No alias transcription factor (YABBY) 0.03 Archaeplastida
MA_407206g0010 No alias transcription factor (YABBY) 0.02 Archaeplastida
Solyc01g010240.3.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
Solyc01g091010.3.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
Solyc05g005240.2.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
Solyc05g012050.4.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
Solyc06g073920.3.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
Solyc11g071810.2.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e000845_P005 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e003268_P003 No alias transcription factor (YABBY) 0.07 Archaeplastida
Zm00001e012387_P001 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e012388_P001 No alias transcription factor (YABBY) 0.05 Archaeplastida
Zm00001e017951_P002 No alias transcription factor (YABBY) 0.08 Archaeplastida
Zm00001e032845_P002 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e038717_P002 No alias transcription factor (YABBY) 0.05 Archaeplastida
AMTR_s00096p00054100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 LandPlants
AT2G26580 YAB5 plant-specific transcription factor YABBY family protein 0.04 LandPlants
MA_10432332g0010 No alias transcription factor (YABBY) 0.02 LandPlants
Solyc05g005240.2.1 No alias transcription factor (YABBY) 0.02 LandPlants
Solyc06g073920.3.1 No alias transcription factor (YABBY) 0.04 LandPlants
Zm00001e003268_P003 No alias transcription factor (YABBY) 0.04 LandPlants
Zm00001e017951_P002 No alias transcription factor (YABBY) 0.04 LandPlants
Zm00001e032845_P002 No alias transcription factor (YABBY) 0.02 LandPlants
AT2G26580 YAB5 plant-specific transcription factor YABBY family protein 0.01 SeedPlants
Solyc05g005240.2.1 No alias transcription factor (YABBY) 0.01 SeedPlants
Zm00001e003268_P003 No alias transcription factor (YABBY) 0.03 SeedPlants
Zm00001e017951_P002 No alias transcription factor (YABBY) 0.03 SeedPlants

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006780 YABBY 7 177
No external refs found!