- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : not classified & original description: none
Gene families : OG0001061 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001061_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g02160 | |
| Cluster | HCCA: Cluster_6 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G23400 | CAF2, ATCAF2 | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | 0.05 | OrthoFinder output from all 47 species | |
| AT2G20020 | ATCAF1, CAF1 | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g015702 | ATCAF1, CAF1 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g10007 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g34328 | ATCAF1, CAF1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30903 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g07417 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g14385 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.07 | OrthoFinder output from all 47 species | |
| Cba_g06914 | CAF2, ATCAF2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g72184 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.11G050500.1 | CAF2, ATCAF2,... | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G021700.1 | ATCAF1, CAF1,... | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g10639 | ATCAF1, CAF1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g10026 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01015331001 | ATCAF1, CAF1 | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_15740 | CAF2, ATCAF2 | component CAF of CRS2-CAF plastidial RNA splicing factor... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g22390 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| MA_757065g0010 | CAF2, ATCAF2 | CRS2-associated factor 2, chloroplastic OS=Oryza sativa... | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g13314 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g30110 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g05287 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g56937 | CAF2, ATCAF2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g26827 | No alias | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g018240.4.1 | ATCAF1, CAF1,... | component CAF of CRS2-CAF plastidial RNA splicing factor... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g066300.3.1 | CAF2, ATCAF2,... | component CAF of CRS2-CAF plastidial RNA splicing factor... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g06701 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g10709 | ATCAF1, CAF1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g51985 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
No InterPro domains available for this sequence
| No external refs found! |