Zm00001d034552 (GRMZM2G111609)

Aliases : GRMZM2G111609

Description : 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases Encodes ADPG1, a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set, indehiscent fruit and reduced pollen shedding. ADPG1

Gene families : OG_01_0000383 (Gene family) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d034552
Cluster HCCA cluster: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT3G07970 QRT2 Pectin lyase-like superfamily protein 0.03 Gene family
Zm00001d034551 GRMZM2G092746,... 10.6.3 cell wall.degradation.pectate lyases and... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan
BP GO:0005975 carbohydrate metabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 92 423
No external refs found!