Zm00001d034551 (GRMZM2G092746, GRMZM2G092758)


Aliases : GRMZM2G092746, GRMZM2G092758

Description : 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases Encodes ADPG1, a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set, indehiscent fruit and reduced pollen shedding. ADPG1


Gene families : OG_01_0000383 (Gene family) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d034551

Target Alias Description ECC score Gene Family Method Actions
AT2G41850 ADPG2, PGAZAT polygalacturonase abscission zone A. thaliana 0.02 Gene family
LOC_Os07g10680 Os07g0207600 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Solyc01g087280.1.1 Solyc01g087280.1 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Solyc04g015530.2.1 Solyc04g015530.2 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Zm00001d013032 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Zm00001d034552 GRMZM2G111609 10.6.3 cell wall.degradation.pectate lyases and... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan
BP GO:0005975 carbohydrate metabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 89 420
No external refs found!