AMTR_s00090p00165440 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00090.97

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter


Gene families : OG_01_0000057 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000057_tree ,
OG_02_0000720 (LandPlants) Phylogenetic Tree(s): OG_02_0000720_tree ,
OG_03_0000544 (SeedPlants) Phylogenetic Tree(s): OG_03_0000544_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00090p00165440
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00263610 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00017p00164980 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 Archaeplastida
AMTR_s00018p00193700 evm_27.TU.AmTr_v1... ABC transporter B family member 14 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00018p00193820 evm_27.TU.AmTr_v1... ABC transporter B family member 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00045p00108620 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 Archaeplastida
AMTR_s00045p00109940 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 Archaeplastida
AMTR_s00048p00046670 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 Archaeplastida
AT1G02530 PGP12 P-glycoprotein 12 0.04 Archaeplastida
AT1G27940 PGP13 P-glycoprotein 13 0.04 Archaeplastida
AT4G01820 PGP3, MDR3 P-glycoprotein 3 0.03 Archaeplastida
AT4G01830 PGP5 P-glycoprotein 5 0.03 Archaeplastida
AT4G25960 PGP2 P-glycoprotein 2 0.03 Archaeplastida
AT5G46540 PGP7 P-glycoprotein 7 0.04 Archaeplastida
Cre17.g725150 No alias ABC transporter B family member 7 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01013125001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01015306001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01021365001 No alias Solute transport.primary active transport.ABC... 0.05 Archaeplastida
GSVIVT01021366001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01032578001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Gb_02469 No alias subfamily ABCB transporter 0.03 Archaeplastida
Gb_07563 No alias subfamily ABCB transporter 0.03 Archaeplastida
Gb_13906 No alias subfamily ABCB transporter 0.05 Archaeplastida
Gb_13908 No alias ABC transporter B family member 10 OS=Arabidopsis... 0.04 Archaeplastida
Gb_33057 No alias subfamily ABCB transporter 0.02 Archaeplastida
Gb_33058 No alias subfamily ABCB transporter 0.02 Archaeplastida
LOC_Os01g18670.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
LOC_Os02g46680.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
MA_10432922g0010 No alias subfamily ABCB transporter 0.03 Archaeplastida
MA_126766g0010 No alias subfamily ABCB transporter 0.03 Archaeplastida
MA_18863g0010 No alias subfamily ABCB transporter 0.02 Archaeplastida
MA_934204g0010 No alias subfamily ABCB transporter 0.03 Archaeplastida
Pp3c1_31680V3.1 No alias ABC transporter family protein 0.02 Archaeplastida
Smo176522 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Solyc03g005860.4.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
Solyc06g009280.1.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
Solyc08g076720.4.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
Solyc11g067300.2.1 No alias subfamily ABCB transporter 0.04 Archaeplastida
Solyc11g067310.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g098840.3.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
Zm00001e014797_P002 No alias subfamily ABCB transporter 0.05 Archaeplastida
Zm00001e020073_P001 No alias subfamily ABCB transporter 0.02 Archaeplastida
Zm00001e023274_P001 No alias subfamily ABCB transporter 0.05 Archaeplastida
Zm00001e025063_P001 No alias subfamily ABCB transporter 0.01 Archaeplastida
Zm00001e041008_P003 No alias auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 Archaeplastida
Zm00001e041087_P002 No alias subfamily ABCB transporter 0.03 Archaeplastida
GSVIVT01000580001 No alias ABC transporter B family member 15 OS=Arabidopsis thaliana 0.02 LandPlants
GSVIVT01032578001 No alias Solute transport.primary active transport.ABC... 0.02 LandPlants
Gb_02469 No alias subfamily ABCB transporter 0.03 LandPlants
MA_10432922g0010 No alias subfamily ABCB transporter 0.03 LandPlants
MA_934204g0010 No alias subfamily ABCB transporter 0.03 LandPlants
Pp3c1_31680V3.1 No alias ABC transporter family protein 0.01 LandPlants
Zm00001e014797_P002 No alias subfamily ABCB transporter 0.03 LandPlants
Zm00001e025063_P001 No alias subfamily ABCB transporter 0.01 LandPlants
Zm00001e041087_P002 No alias subfamily ABCB transporter 0.02 LandPlants
MA_10432922g0010 No alias subfamily ABCB transporter 0.01 SeedPlants
MA_934204g0010 No alias subfamily ABCB transporter 0.01 SeedPlants
Zm00001e014797_P002 No alias subfamily ABCB transporter 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006810 transport IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 1042 1167
IPR003439 ABC_transporter-like 405 530
No external refs found!