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  5. Ore_g01518

Ore_g01518


Description : TCP-type transcription factor & original description: none


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g01518
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Adi_g007407 AT-TCP20, TCP20,... circAdian clock activation factor *(TCP20) & original... 0.07 OrthoFinder output from all 47 species
Adi_g010474 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g02657 No alias TCP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g03168 No alias TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23450 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g32344 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0175.g024570 No alias TCP-type transcription factor & original description: CDS=1-1014 0.02 OrthoFinder output from all 47 species
Solyc03g006800.1.1 Solyc03g006800 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e010190_P001 Zm00001e010190 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e015209_P001 Zm00001e015209 transcription factor (TCP). CHE circadian clock repression factor 0.04 OrthoFinder output from all 47 species
Zm00001e018800_P001 AT-TCP20, TCP20,... transcription factor (TCP). TCP20 circadian clock... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 2 78
No external refs found!