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  5. LOC_Os12g40520.1

LOC_Os12g40520.1


Description : TRAF1 endomembrane trafficking ATG6-stability regulator protein


Gene families : OG_01_0001944 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001944_tree ,
OG_02_0002285 (LandPlants) Phylogenetic Tree(s): OG_02_0002285_tree ,
OG_03_0002760 (SeedPlants) Phylogenetic Tree(s): OG_03_0002760_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g40520.1
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Cre12.g494000 No alias Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.02 Archaeplastida
GSVIVT01018133001 No alias Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.04 Archaeplastida
MA_10434493g0010 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.03 Archaeplastida
Mp8g14880.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.07 Archaeplastida
Pp3c12_900V3.1 No alias TRAF-like superfamily protein 0.05 Archaeplastida
Pp3c17_710V3.1 No alias TRAF-like superfamily protein 0.08 Archaeplastida
Solyc03g005430.4.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.05 Archaeplastida
Zm00001e003140_P001 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.07 Archaeplastida
Zm00001e018034_P004 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 Archaeplastida
Zm00001e027387_P004 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.05 Archaeplastida
Zm00001e032087_P004 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.06 Archaeplastida
GSVIVT01018133001 No alias Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.03 LandPlants
MA_10434493g0010 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.03 LandPlants
Mp8g14880.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.04 LandPlants
Pp3c12_900V3.1 No alias TRAF-like superfamily protein 0.04 LandPlants
Pp3c17_710V3.1 No alias TRAF-like superfamily protein 0.07 LandPlants
Solyc03g005430.4.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.05 LandPlants
Solyc09g089560.4.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 LandPlants
Zm00001e003140_P001 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.06 LandPlants
Zm00001e018034_P004 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 LandPlants
GSVIVT01018133001 No alias Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.02 SeedPlants
MA_10434493g0010 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 SeedPlants
Solyc03g005430.4.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.05 SeedPlants
Solyc09g089560.4.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 SeedPlants
Zm00001e003140_P001 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.06 SeedPlants
Zm00001e018034_P004 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 76 193
No external refs found!