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  5. Aev_g14486

Aev_g14486 (RPE, EMB2728)


Aliases : RPE, EMB2728

Description : EC_5.1 racemase or epimerase & original description: none


Gene families : OG0004751 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004751_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g14486
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Als_g27840 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32397 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G052500.1 RPE, EMB2728,... EC_5.1 racemase or epimerase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.30G051300.1 RPE, EMB2728,... EC_5.1 racemase or epimerase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g15437 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g42634 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06530 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007976001 RPE, EMB2728 Photosynthesis.calvin cycle.phosphopentose epimerase 0.06 OrthoFinder output from all 47 species
Gb_19425 RPE, EMB2728 phosphopentose epimerase 0.04 OrthoFinder output from all 47 species
LOC_Os03g07300.1 RPE, EMB2728,... phosphopentose epimerase 0.03 OrthoFinder output from all 47 species
Len_g59136 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06506 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g11661 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
MA_92814g0010 RPE, EMB2728 phosphopentose epimerase 0.04 OrthoFinder output from all 47 species
Msp_g05510 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g19497 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06182 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g08509 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61783 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Smo228435 RPE, EMB2728 Photosynthesis.calvin cycle.phosphopentose epimerase 0.03 OrthoFinder output from all 47 species
Solyc03g115820.3.1 RPE, EMB2728,... phosphopentose epimerase 0.02 OrthoFinder output from all 47 species
Spa_g28901 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40504 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g16249 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000056 Ribul_P_3_epim-like 76 274
No external refs found!