LOC_Os12g39830.1


Description : cyclin (CYCD)


Gene families : OG_01_0000252 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000252_tree ,
OG_02_0007410 (LandPlants) Phylogenetic Tree(s): OG_02_0007410_tree ,
OG_03_0004640 (SeedPlants) Phylogenetic Tree(s): OG_03_0004640_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g39830.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00148150 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 Archaeplastida
AMTR_s00072p00074880 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 Archaeplastida
AMTR_s00135p00066200 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
AMTR_s00190p00017930 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 Archaeplastida
AT4G34160 CYCD3, CYCD3;1 CYCLIN D3;1 0.06 Archaeplastida
AT5G67260 CYCD3;2 CYCLIN D3;2 0.05 Archaeplastida
GSVIVT01000226001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.05 Archaeplastida
GSVIVT01003175001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.07 Archaeplastida
GSVIVT01009432001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.05 Archaeplastida
Gb_02122 No alias cyclin (CYCD) 0.03 Archaeplastida
Gb_03361 No alias cyclin (CYCD) 0.03 Archaeplastida
LOC_Os03g42070.1 No alias cyclin (CYCD) 0.04 Archaeplastida
LOC_Os09g21450.1 No alias cyclin (CYCD) 0.03 Archaeplastida
MA_10429174g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10429174g0030 No alias cyclin (CYCD) 0.02 Archaeplastida
MA_114375g0010 No alias cyclin (CYCD) 0.04 Archaeplastida
MA_93221g0010 No alias cyclin (CYCD) 0.06 Archaeplastida
MA_94639g0010 No alias cyclin (CYCD) 0.02 Archaeplastida
Solyc02g079370.3.1 No alias cyclin (CYCD) 0.03 Archaeplastida
Solyc04g076040.3.1 No alias cyclin (CYCD) 0.02 Archaeplastida
Solyc07g054950.2.1 No alias cyclin (CYCD) 0.07 Archaeplastida
Solyc12g088650.2.1 No alias cyclin (CYCD) 0.04 Archaeplastida
Zm00001e009441_P003 No alias cyclin (CYCD) 0.06 Archaeplastida
Zm00001e018000_P001 No alias cyclin (CYCD) 0.03 Archaeplastida
Zm00001e033498_P001 No alias cyclin (CYCD) 0.06 Archaeplastida
Zm00001e034405_P005 No alias cyclin (CYCD) 0.03 Archaeplastida
Zm00001e035215_P001 No alias cyclin (CYCD) 0.03 Archaeplastida
Zm00001e035575_P002 No alias cyclin (CYCD) 0.02 Archaeplastida
Zm00001e038767_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g42070.1 No alias cyclin (CYCD) 0.04 LandPlants
Zm00001e009982_P002 No alias cyclin (CYCD) 0.02 LandPlants
Zm00001e018000_P001 No alias cyclin (CYCD) 0.03 LandPlants
Zm00001e038767_P002 No alias no hits & (original description: none) 0.03 LandPlants
LOC_Os03g42070.1 No alias cyclin (CYCD) 0.04 SeedPlants
Zm00001e038767_P002 No alias no hits & (original description: none) 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 203 318
IPR006671 Cyclin_N 98 199
No external refs found!