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  5. Ore_g00226

Ore_g00226


Description : not classified & original description: none


Gene families : OG0000293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g00226

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00154260 evm_27.TU.AmTr_v1... Cell number regulator 6 OS=Zea mays 0.02 OrthoFinder output from all 47 species
Als_g07666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18186.t1 Aspi01Gene18186 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0327.g065264 No alias not classified & original description: CDS=216-797 0.03 OrthoFinder output from all 47 species
LOC_Os01g16210.1 LOC_Os01g16210 Cell number regulator 5 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
LOC_Os03g01210.1 LOC_Os03g01210 Cell number regulator 6 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Len_g03169 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430386g0010 PCR2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g05225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c12_24570V3.1 Pp3c12_24570 PLAC8 family protein 0.01 OrthoFinder output from all 47 species
Pp3c12_24580V3.1 Pp3c12_24580 PLAC8 family protein 0.01 OrthoFinder output from all 47 species
Solyc08g013920.3.1 Solyc08g013920 Cell number regulator 1 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Tin_g31369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 62 188
No external refs found!