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  5. LOC_Os12g39320.1

LOC_Os12g39320.1


Description : calcium-permeable channel (OSCA)


Gene families : OG_01_0000175 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000175_tree ,
OG_02_0001215 (LandPlants) Phylogenetic Tree(s): OG_02_0001215_tree ,
OG_03_0001435 (SeedPlants) Phylogenetic Tree(s): OG_03_0001435_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g39320.1
Cluster HCCA: Cluster_331

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00143150 evm_27.TU.AmTr_v1... Solute transport.channels.OSCA calcium-permeable channel 0.05 Archaeplastida
AT1G11960 No alias ERD (early-responsive to dehydration stress) family protein 0.05 Archaeplastida
AT1G30360 ERD4 Early-responsive to dehydration stress protein (ERD4) 0.03 Archaeplastida
AT1G69450 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 Archaeplastida
AT3G54510 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 Archaeplastida
Cre08.g360500 No alias CSC1-like protein At1g62320 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01000831001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.03 Archaeplastida
GSVIVT01011543001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.03 Archaeplastida
GSVIVT01012666001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.04 Archaeplastida
Gb_11287 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
LOC_Os03g47070.1 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
MA_10428484g0010 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
Mp8g07950.1 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
Pp3c10_14590V3.1 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Archaeplastida
Pp3c17_22430V3.1 No alias Early-responsive to dehydration stress protein (ERD4) 0.03 Archaeplastida
Smo41460 No alias Solute transport.channels.OSCA calcium-permeable channel 0.02 Archaeplastida
Solyc02g036260.4.1 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
Solyc02g081030.4.1 No alias calcium-permeable channel (OSCA) 0.05 Archaeplastida
Zm00001e012117_P001 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
GSVIVT01000831001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.02 LandPlants
GSVIVT01009282001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.03 LandPlants
Gb_06754 No alias calcium-permeable channel (OSCA) 0.02 LandPlants
MA_10428484g0010 No alias calcium-permeable channel (OSCA) 0.02 LandPlants
Pp3c17_22430V3.1 No alias Early-responsive to dehydration stress protein (ERD4) 0.03 LandPlants
Zm00001e012117_P001 No alias calcium-permeable channel (OSCA) 0.02 LandPlants
GSVIVT01011464001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.02 SeedPlants
Gb_06754 No alias calcium-permeable channel (OSCA) 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR027815 PHM7_cyt 174 329
IPR032880 Csc1_N 6 153
IPR003864 RSN1_7TM 342 606
No external refs found!