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  5. Ppi_g63943

Ppi_g63943 (LHCA2*1, LHCA6)


Aliases : LHCA2*1, LHCA6

Description : non-photochemical quenching LhcSR protein & original description: none


Gene families : OG0009764 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009764_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g63943
Cluster HCCA: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
Als_g61396 LHCA2*1, LHCA6 non-photochemical quenching LhcSR protein & original... 0.08 OrthoFinder output from all 47 species
Aop_g15836 LHCA2*1, LHCA6 non-photochemical quenching LhcSR protein & original... 0.07 OrthoFinder output from all 47 species
Pnu_g31043 LHCA2 non-photochemical quenching LhcSR protein & original... 0.07 OrthoFinder output from all 47 species
Ppi_g08578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10166 LHCA1 non-photochemical quenching LhcSR protein & original... 0.05 OrthoFinder output from all 47 species
Ppi_g15204 LHCA2*1, LHCA6 non-photochemical quenching LhcSR protein & original... 0.02 OrthoFinder output from all 47 species
Ppi_g25469 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g27533 LHCA2 non-photochemical quenching LhcSR protein & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 59 223
No external refs found!