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  5. Ppi_g63452

Ppi_g63452 (PUM7, APUM7)


Aliases : PUM7, APUM7

Description : not classified & original description: none


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g63452

Target Alias Description ECC score Gene Family Method Actions
AT5G56510 APUM12, PUM12 pumilio 12 0.02 OrthoFinder output from all 47 species
Aev_g13809 APUM12, PUM12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0040.g026500 APUM12, PUM12 not classified & original description: CDS=1-2874 0.03 OrthoFinder output from all 47 species
Cre12.g544700 PUM7, APUM7 Pumilio homolog 12 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Len_g13938 PUM7, APUM7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04974 PUM7, APUM7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000001 PUM7, APUM7 not classified & original description: CDS=1-2403 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 808 842
IPR001313 Pumilio_RNA-bd_rpt 774 792
IPR001313 Pumilio_RNA-bd_rpt 589 623
IPR001313 Pumilio_RNA-bd_rpt 701 731
IPR001313 Pumilio_RNA-bd_rpt 667 690
IPR001313 Pumilio_RNA-bd_rpt 736 769
IPR001313 Pumilio_RNA-bd_rpt 625 658
IPR001313 Pumilio_RNA-bd_rpt 846 864
No external refs found!