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  5. Ppi_g63313

Ppi_g63313


Description : not classified & original description: none


Gene families : OG0005853 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005853_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g63313
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Adi_g110755 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0123.g048442 No alias not classified & original description: CDS=180-2516 0.02 OrthoFinder output from all 47 species
Cre01.g022350 No alias DEAD-box ATP-dependent RNA helicase 13 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g01929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17547 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010909 No alias not classified & original description: CDS=107-2290 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 503 611
IPR011545 DEAD/DEAH_box_helicase_dom 217 437
No external refs found!