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  5. Ppi_g63138

Ppi_g63138


Description : not classified & original description: none


Gene families : OG0000599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g63138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00153800 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G08050 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035638 No alias not classified & original description: CDS=1-2802 0.02 OrthoFinder output from all 47 species
Ceric.24G014600.1 Ceric.24G014600 not classified & original description: pacid=50629291... 0.03 OrthoFinder output from all 47 species
GSVIVT01009240001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01019190001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os10g32760.1 LOC_Os10g32760 Probable E3 ubiquitin-protein ligase WAVH2... 0.02 OrthoFinder output from all 47 species
LOC_Os11g11610.1 LOC_Os11g11610 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g24649 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g29530 No alias E3 ubiquitin ligase *(WAV3) & original description: none 0.06 OrthoFinder output from all 47 species
Solyc11g069600.2.1 Solyc11g069600 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g06760 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e008822_P002 Zm00001e008822 ubiquitin protein ligase (WAV3) 0.03 OrthoFinder output from all 47 species
Zm00001e010994_P001 Zm00001e010994 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e016170_P004 Zm00001e016170 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032838 Vwaint_dom 663 730
IPR002035 VWF_A 315 492
IPR001841 Znf_RING 74 103
No external refs found!