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  5. Ppi_g62818

Ppi_g62818 (MSI1, MEE70, ATMSI1)


Aliases : MSI1, MEE70, ATMSI1

Description : component *(MSI1) of PRC2 histone methylation complex & original description: none


Gene families : OG0001615 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001615_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g62818

Target Alias Description ECC score Gene Family Method Actions
Aop_g05698 MSI1, MEE70, ATMSI1 component *(MSI1) of PRC2 histone methylation complex &... 0.05 OrthoFinder output from all 47 species
Ceric.19G012200.1 MSI1, MEE70,... component *(MSI1) of PRC2 histone methylation complex &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000808.15 MSI1, MEE70, ATMSI1 Chromatin organisation.histone chaperone activities.CAF1... 0.01 OrthoFinder output from all 47 species
Dac_g08708 MSI1, MEE70, ATMSI1 component *(CAF1c/MSI) of CAF1 histone chaperone complex... 0.03 OrthoFinder output from all 47 species
Dac_g38232 MSI1, MEE70, ATMSI1 component *(MSI1) of PRC2 histone methylation complex &... 0.03 OrthoFinder output from all 47 species
LOC_Os09g36900.1 MSI1, MEE70,... component CAF1c/MSI of CAF1 histone chaperone complex 0.02 OrthoFinder output from all 47 species
Lfl_g12937 MSI1, MEE70, ATMSI1 component *(MSI1) of PRC2 histone methylation complex &... 0.04 OrthoFinder output from all 47 species
Nbi_g09174 MSI1, MEE70, ATMSI1 component *(MSI1) of PRC2 histone methylation complex &... 0.05 OrthoFinder output from all 47 species
Sam_g11292 No alias component *(MSI1) of PRC2 histone methylation complex &... 0.05 OrthoFinder output from all 47 species
Tin_g09251 MSI1, MEE70, ATMSI1 component *(MSI1) of PRC2 histone methylation complex &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 222 257
IPR001680 WD40_repeat 308 346
IPR001680 WD40_repeat 367 402
IPR001680 WD40_repeat 265 301
IPR022052 Histone-bd_RBBP4_N 19 88
No external refs found!