Ppi_g62452


Description : substrate adaptor *(FBS) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0001990 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001990_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g62452

Target Alias Description ECC score Gene Family Method Actions
Adi_g002761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28361 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.11 OrthoFinder output from all 47 species
Als_g08740 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.08 OrthoFinder output from all 47 species
Als_g13408 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.08 OrthoFinder output from all 47 species
Aop_g05457 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
Aop_g11326 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.09 OrthoFinder output from all 47 species
Aspi01Gene38775.t1 Aspi01Gene38775 substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015281 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Cba_g07535 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Cba_g38475 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Ceric.01G076500.1 Ceric.01G076500 substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Ceric.05G056900.1 Ceric.05G056900 substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ceric.12G033400.1 Ceric.12G033400 substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Dac_g02785 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dcu_g09074 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dcu_g09432 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Gb_30100 No alias F-box protein At4g35930 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os10g30280.1 LOC_Os10g30280 F-box protein At4g35930 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g14639 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.07 OrthoFinder output from all 47 species
MA_19354g0010 No alias F-box protein At4g35930 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g07159 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.1 OrthoFinder output from all 47 species
Msp_g42845 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.07 OrthoFinder output from all 47 species
Ore_g26320 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015888 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sam_g24407 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.09 OrthoFinder output from all 47 species
Solyc03g033390.3.1 Solyc03g033390 F-box protein At4g35930 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc10g005480.3.1 Solyc10g005480 F-box protein SKIP27 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Tin_g08863 No alias substrate adaptor *(FBS) of SCF E3 ubiquiTin ligase... 0.09 OrthoFinder output from all 47 species
Tin_g12923 No alias substrate adaptor *(FBS) of SCF E3 ubiquiTin ligase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!