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  5. Ppi_g61964

Ppi_g61964 (HTB4)


Aliases : HTB4

Description : histone *(H2B) & original description: none


Gene families : OG0000176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g61964
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00085300 HTB4,... Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
AMTR_s00012p00085960 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
AMTR_s00012p00088340 HTB4,... Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
AT3G46030 HTB11 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g019244 No alias histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27849 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36120 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58540.t1 HTB1, Aspi01Gene58540 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G007900.1 HTB4, Ceric.03G007900 histone *(H2B) & original description: pacid=50571513... 0.04 OrthoFinder output from all 47 species
Ceric.18G011100.1 HTB4, Ceric.18G011100 histone *(H2B) & original description: pacid=50622059... 0.02 OrthoFinder output from all 47 species
Ceric.20G039500.1 HTB4, Ceric.20G039500 histone *(H2B) & original description: pacid=50566293... 0.02 OrthoFinder output from all 47 species
Ceric.24G053100.1 HTB4, Ceric.24G053100 histone *(H2B) & original description: pacid=50628870... 0.02 OrthoFinder output from all 47 species
Cre06.g264900 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g271376 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274250 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g275800 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g276550 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g504700 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g506200 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre13.g570050 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g709150 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g710450 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g711750 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g713450 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g714050 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Ehy_g06545 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016164001 No alias Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
GSVIVT01025021001 No alias Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
GSVIVT01025025001 No alias Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Gb_07112 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
LOC_Os05g49860.1 HTB11, LOC_Os05g49860 histone (H2B) 0.02 OrthoFinder output from all 47 species
Len_g04914 HTB4 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434433g0010 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
MA_10435143g0020 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
Pp3c14_21050V3.1 HTB4, Pp3c14_21050 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c6_27740V3.1 HTB4, Pp3c6_27740 Histone superfamily protein 0.01 OrthoFinder output from all 47 species
Sam_g35037 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37866 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g013510.1.1 HTB11, Solyc12g013510 histone (H2B) 0.02 OrthoFinder output from all 47 species
Spa_g45813 HTB4 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09273 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023342_P001 HTB4, Zm00001e023342 histone (H2B) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 16 109
No external refs found!