Zm00001d033979 (GRMZM2G149775)

Aliases : GRMZM2G149775

Description : DNA.synthesis/chromatin structure.histone.core.H2A Encodes HTA11, a histone H2A protein. histone H2A 11 (HTA11)

Gene families : OG_01_0001029 (Gene family) Phylogenetic Tree(s): OG0001029_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d033979
Cluster HCCA cluster: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
AT3G54560 HTA11 histone H2A 11 0.04 Gene family
LOC_Os03g06670 Os03g0162200 DNA.synthesis/chromatin... 0.02 Gene family
LOC_Os10g28230 Os10g0418000 DNA.synthesis/chromatin... 0.02 Gene family
Solyc06g084090.3.1 Solyc06g084090.3 DNA.synthesis/chromatin... 0.05 Gene family
Zm00001d013300 GRMZM2G050833 DNA.synthesis/chromatin... 0.05 Gene family
Zm00001d027760 GRMZM2G056231 DNA.synthesis/chromatin... 0.04 Gene family

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 13 106
IPR032454 Histone_H2A_C 107 136
No external refs found!