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  5. Ppi_g61644

Ppi_g61644


Description : not classified & original description: none


Gene families : OG0013275 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g61644
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Aop_g21767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23886 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 171 218
IPR002885 Pentatricopeptide_repeat 676 724
IPR002885 Pentatricopeptide_repeat 575 623
IPR002885 Pentatricopeptide_repeat 474 522
IPR002885 Pentatricopeptide_repeat 273 319
IPR002885 Pentatricopeptide_repeat 911 957
IPR002885 Pentatricopeptide_repeat 812 838
IPR002885 Pentatricopeptide_repeat 885 910
IPR002885 Pentatricopeptide_repeat 1021 1046
IPR002885 Pentatricopeptide_repeat 753 775
IPR002885 Pentatricopeptide_repeat 247 269
IPR002885 Pentatricopeptide_repeat 783 807
IPR002885 Pentatricopeptide_repeat 376 406
IPR002885 Pentatricopeptide_repeat 1050 1077
No external refs found!