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  5. Ppi_g60088

Ppi_g60088 (HTB4)


Aliases : HTB4

Description : histone *(H2B) & original description: none


Gene families : OG0000176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g60088

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00085960 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
Adi_g031895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21936 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31074 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36120 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28637 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12643 No alias histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene17135.t1 HTB4, Aspi01Gene17135 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58540.t1 HTB1, Aspi01Gene58540 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000944.18 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Dac_g44717 HTB4 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g08878 HTB4 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19092 HTB4 histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g06010.1 HTB11, LOC_Os01g06010 histone (H2B) 0.02 OrthoFinder output from all 47 species
Lfl_g23041 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14132 No alias histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60966 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19014 HTB11 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13958 No alias histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e038466_P001 HTB1, Zm00001e038466 histone (H2B) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 14 124
No external refs found!