1. Home
  2. Species
  3. Angiopteris evecta
  4. Sequence
  5. Aev_g13951

Aev_g13951 (APUM24, PUM24)


Aliases : APUM24, PUM24

Description : rRNA processing factor involved in ITS2 rRNA removal *(APUM24) & original description: none


Gene families : OG0004290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004290_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g13951

Target Alias Description ECC score Gene Family Method Actions
Adi_g010373 APUM24, PUM24 rRNA processing factor involved in ITS2 rRNA removal... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.61 APUM24, PUM24 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dcu_g01831 APUM24, PUM24 rRNA processing factor involved in ITS2 rRNA removal... 0.02 OrthoFinder output from all 47 species
GSVIVT01035090001 APUM24, PUM24 Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
LOC_Os03g61560.1 APUM24, PUM24,... APUM24 rRNA processing factor involved in ITS2 rRNA removal 0.03 OrthoFinder output from all 47 species
MA_9586059g0010 APUM24, PUM24 Pumilio homolog 24 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp7g01710.1 APUM24, PUM24 APUM24 rRNA processing factor involved in ITS2 rRNA removal 0.02 OrthoFinder output from all 47 species
Zm00001e006271_P002 APUM24, PUM24,... APUM24 rRNA processing factor involved in ITS2 rRNA removal 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019905 syntaxin binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR012959 CPL_dom 480 593
IPR001313 Pumilio_RNA-bd_rpt 128 151
IPR001313 Pumilio_RNA-bd_rpt 154 186
No external refs found!