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  5. Ppi_g59906

Ppi_g59906


Description : cation exchanger *(NCL/EF-CAX) & original description: none


Gene families : OG0000757 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000757_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g59906
Cluster HCCA: Cluster_286

Target Alias Description ECC score Gene Family Method Actions
AT2G34020 No alias Calcium-binding EF-hand family protein 0.05 OrthoFinder output from all 47 species
AT2G34030 No alias Calcium-binding EF-hand family protein 0.02 OrthoFinder output from all 47 species
Ala_g28095 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.1 OrthoFinder output from all 47 species
Als_g16002 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g43206 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29281 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g59636 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene07327.t2 Aspi01Gene07327 cation exchanger *(NCL/EF-CAX) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene07409.t1 Aspi01Gene07409 cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0009.g011783 No alias cation exchanger *(NCL/EF-CAX) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G076200.1 Ceric.20G076200 cation exchanger *(NCL/EF-CAX) & original description:... 0.01 OrthoFinder output from all 47 species
Dde_g25726 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01014240001 No alias Solute transport.carrier-mediated transport.CDF... 0.02 OrthoFinder output from all 47 species
GSVIVT01014241001 No alias Solute transport.carrier-mediated transport.CDF... 0.03 OrthoFinder output from all 47 species
GSVIVT01020661001 No alias Solute transport.carrier-mediated transport.CDF... 0.02 OrthoFinder output from all 47 species
GSVIVT01021164001 No alias Solute transport.carrier-mediated transport.CDF... 0.03 OrthoFinder output from all 47 species
Gb_22444 No alias cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species
LOC_Os01g11414.1 LOC_Os01g11414 cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
Len_g16412 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34847 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g16288 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g17606 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
MA_104140g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_98848g0020 No alias cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species
Mp5g15300.1 No alias cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species
Mp8g02300.1 No alias cation exchanger (NCL/EF-CAX) 0.05 OrthoFinder output from all 47 species
Mp8g02310.1 No alias cation exchanger (NCL/EF-CAX) 0.05 OrthoFinder output from all 47 species
Mp8g02320.1 No alias cation exchanger (NCL/EF-CAX) 0.01 OrthoFinder output from all 47 species
Msp_g19546 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31579 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.11 OrthoFinder output from all 47 species
Nbi_g10648 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g41366 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13051 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23473 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g006260.4.1 Solyc03g006260 cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species
Solyc04g039960.4.1 Solyc04g039960 Sodium/calcium exchanger NCL2 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Spa_g33354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49587 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52188 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 331 397
IPR004837 NaCa_Exmemb 111 290
No external refs found!